oss://choppy-cromwell-result/test-choppy/iseq_150pe_rnaseq_20200221_wangshangzi/43061775-40e6-47e7-8f07-b961b44c596f/call-samtools/GCCACATA_S9_L001_R1_001.sorted.bam | |||||
oss://choppy-cromwell-result/test-choppy/iseq_150pe_rnaseq_20200221_wangshangzi/49bd025e-5275-4fbd-9e67-b279b08ce8b5/call-samtools/F1_S6_L001_R1_001.sorted.bam |
workflow {{ project_name }} { | workflow {{ project_name }} { | ||||
File input_samples_file | |||||
File input_samples | |||||
File bed_file | File bed_file | ||||
Array[File] bam = read_lines(input_samples_file) | |||||
Array[File] bam = read_lines(input_samples) | |||||
call bedtools.bedtools as bedtools { | call bedtools.bedtools as bedtools { | ||||
input: | input: | ||||
bam=bam, | bam=bam, |