Se han modificado 2 ficheros con 4 adiciones y 2 borrados
+ 2
- 0
input_samples.tsv
Ver fichero
| @@ -0,0 +1,2 @@ | |||
| oss://choppy-cromwell-result/test-choppy/iseq_150pe_rnaseq_20200221_wangshangzi/43061775-40e6-47e7-8f07-b961b44c596f/call-samtools/GCCACATA_S9_L001_R1_001.sorted.bam | |||
| oss://choppy-cromwell-result/test-choppy/iseq_150pe_rnaseq_20200221_wangshangzi/49bd025e-5275-4fbd-9e67-b279b08ce8b5/call-samtools/F1_S6_L001_R1_001.sorted.bam | |||
+ 2
- 2
workflow.wdl
Ver fichero
| @@ -2,9 +2,9 @@ import "./tasks/bedtools.wdl" as bedtools | |||
| workflow {{ project_name }} { | |||
| File input_samples_file | |||
| File input_samples | |||
| File bed_file | |||
| Array[File] bam = read_lines(input_samples_file) | |||
| Array[File] bam = read_lines(input_samples) | |||
| call bedtools.bedtools as bedtools { | |||
| input: | |||
| bam=bam, | |||
Cargando…