revised-bedtools-task

workflow.wdl

@@ -2,9 +2,9 @@ import "./tasks/bedtools.wdl" as bedtools
 
 workflow {{ project_name }} {
 
-	File input_samples
+	File input_samples_file
 	File bed_file
-	Array[File] bam = read_lines(input_samples)
+	Array[File] bam = read_lines(input_samples_file)
 	call bedtools.bedtools as bedtools {
 			input:
 			bam=bam,