共有 1 個檔案被更改，包括 7 行新增 和 6 行删除
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tasks/bamdst.wdl
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| set -o pipefail | set -o pipefail | ||||
| set -e | set -e | ||||
| nt=$(nproc) | nt=$(nproc) | ||||
| bamdst -p ${bed} -o ./ ${bam} | bamdst -p ${bed} -o ./ ${bam} | ||||
| cp ./chromosomes.report ./${sample}_chromosomes.report | |||||
| cp ./coverage.report ./${sample}_coverage.report | |||||
| cp ./depth_distribution.plot ./${sample}_depth_distribution.plot | |||||
| cp ./insertsize.plot ./${sample}_insertsize.plot | |||||
| cp ./region.tsv.gz ./${sample}_region.tsv.gz | |||||
| cp ./uncover.bed ./${sample}_uncover.bed | |||||
| cp chromosomes.report ${sample}_chromosomes.report | |||||
| cp coverage.report ${sample}_coverage.report | |||||
| cp depth_distribution.plot ${sample}_depth_distribution.plot | |||||
| cp insertsize.plot ${sample}_insertsize.plot | |||||
| cp region.tsv.gz ${sample}_region.tsv.gz | |||||
| cp uncover.bed ${sample}_uncover.bed | |||||
| >>> | >>> | ||||
| runtime { | runtime { |
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