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Varscan2
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Variant calling using Varscan somatic, processSomatic and somaticFilter based on BAM file.
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Albero (Tree): 8c7fd5db38
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Varscan2/tasks
YaqingLiu 8c7fd5db38 Fix bug: processSomatic cmd 4 anni fa
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annovar.wdl Add processSomatic and somaticFilter; motify annovar and vcf2maf module 4 anni fa
processSomatic.wdl Fix bug: processSomatic input 4 anni fa
somatic.wdl Add processSomatic and somaticFilter; motify annovar and vcf2maf module 4 anni fa
somaticFilter.wdl Fix bug: processSomatic cmd 4 anni fa
vcf2maf.wdl Add processSomatic and somaticFilter; motify annovar and vcf2maf module 4 anni fa