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Fix bug: Sibling nodes have conflicting names

master
YaqingLiu 4 anni fa
parent
commit
0e23016180
1 ha cambiato i file con 4 aggiunte e 4 eliminazioni
  1. +4
    -4
      tasks/vcf2maf.wdl

+ 4
- 4
tasks/vcf2maf.wdl Vedi File

@@ -2,14 +2,14 @@ task vcf2maf {

String sample
File multianno_txt
String maf = basename(multianno_txt,".hg38_multianno.txt")
String maf_name = basename(multianno_txt,".hg38_multianno.txt")
String docker
String cluster_config
String disk_size

command <<<
vcf2maf ${multianno_txt} ${maf}.maf
vcf2maf ${multianno_txt} ${maf_name}.maf
>>>

runtime {
@@ -20,6 +20,6 @@ task vcf2maf {
}

output {
File maf = "${maf}.maf"
File maf = "${maf_name}.maf"
}
}

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