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Update: VEP parameter
master
YaqingLiu
3 years ago
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3ef12a3dd1
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tasks/VEP.wdl
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tasks/VEP.wdl
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@@ -74,6 +74,8 @@ task VEP {
--input-vcf ${basename}.PASS.vep.vcf --output-maf ${basename}.PASS.maf \
$vcf2maf_ID \
--ref-fasta ${ref_dir}/${fasta} \
--ncbi-build ${ncbi_build} \
--species ${species} \
--vep-fork $nt
>>>
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