@@ -61,8 +61,8 @@ workflow {{ project_name }} { | |||
SENTIEON_LICENSE=SENTIEON_LICENSE, | |||
fasta=fasta, | |||
ref_dir=ref_dir, | |||
deduped_bam=fastq_Dedup.realigner_bam, | |||
deduped_bam_index=fastq_Dedup.realigner_bam_index, | |||
deduped_bam=fastq_Dedup.deduped_bam, | |||
deduped_bam_index=fastq_Dedup.deduped_bam_index, | |||
db_mills=db_mills, | |||
dbmills_dir=dbmills_dir, | |||
dbsnp=dbsnp, |