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Remove -f in vaf_ncm.wdl

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YaqingLiu 4 years ago
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      tasks/vaf_ncm.wdl

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tasks/vaf_ncm.wdl View File

mkdir -p /ncm/fastq_vaf mkdir -p /ncm/fastq_vaf
cp ${sep=" " vaf} /ncm/fastq_vaf cp ${sep=" " vaf} /ncm/fastq_vaf


python /opt/NGSCheckMate/vaf_ncm.py -I /ncm/fastq_vaf/ -O '.'' -nz $nt
python /opt/NGSCheckMate/vaf_ncm.py -I /ncm/fastq_vaf/ -O '.' -nz $nt
>>> >>>


runtime { runtime {

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