Calculate the MD5 of INPUT files in bulk.
You can not select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
YaqingLiu 6840250bcc Alter: MD5.wdl 4 anni fa
tasks Alter: MD5.wdl 4 anni fa
.DS_Store first commit 4 anni fa
README.md Update: README.md 4 anni fa
defaults Alter: defaults 4 anni fa
inputs Alter: batch calculation 4 anni fa
workflow.wdl Update: README.md 4 anni fa

README.md

README.md

Author: Yaqing Liu

Email: yaqing.liu@outlook.com

Last Updates: 08/04/2021

This app generates the MD5 of the INPUT files in bulk.

The OUTPUT.md5 file consists of n rows and 2 columns, the first column is the MD5 code and the second column is the corresponding file name.

Requirements

  • choppy
  • Ali-Cloud
  • Linux

Usage

# Install
choppy install YaqingLiu/MD5

# Prepare the input file: samples.json

# Submit your task
choppy batch YaqingLiu/MD5-latest samples.json -p project_name

Input

Please note that the input file is in JSON format.

{
  "sample_id": "sample_id",
  "INPUT": [
    "file_1",
    "file_2",
    "file_3",
    ...,
    "file_n"]
}