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tasks/access.wdl
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| @@ -9,7 +9,7 @@ task access { | |||
| String disk_size | |||
| command << | |||
| if [ $method == "amplicon" ]; then | |||
| if [ ${method}=="amplicon" ]; then | |||
| cp ${bed} access-mappable.bed | |||
| else | |||
| cnvkit.py access -s ${min_gap_size} -o access-mappable.bed ${fasta} | |||
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