ANNOVAR/workflow.wdl

import "./tasks/annovar.wdl" as annovar

workflow {{ project_name }} {
  
  File vcf
  String hg
  File annovar_database
  String annovar_docker
  String disk_size
  String cluster_config

  call annovar.annovar as annovar {
    input: 
    vcf=vcf,
    hg=hg,
    annovar_database=annovar_database,
    docker=annovar_docker,
    cluster_config=cluster_config,
    disk_size=disk_size
  }
}