@@ -9,10 +9,11 @@ task mergefq { | |||
command <<< | |||
set -euo pipefail | |||
if [ ${fq3} != "" ]; then | |||
cat ${fq1} ${fq2} > ${fq_m} | |||
if [ ${fq3} = "" ] | |||
then | |||
cat ${fq1} ${fq2} > ${fq_m} | |||
else | |||
cat ${fq1} ${fq2} ${fq3} > ${fq_m} | |||
cat ${fq1} ${fq2} ${fq3} > ${fq_m} | |||
fi | |||
>>> | |||