@@ -482,8 +482,8 @@ workflow {{ project_name }} { | |||
sample=sample_id + '.N', | |||
fasta=fasta, | |||
ref_dir=ref_dir, | |||
recaled_bam=normal_BQSR_fb.recaled_bam, | |||
recaled_bam_index=normal_BQSR_fb.recaled_bam_index, | |||
recaled_bam=normal_replaceRG.deduped_bam, | |||
recaled_bam_index=normal_replaceRG.deduped_bam_index, | |||
dbsnp=dbsnp, | |||
dbsnp_dir=dbsnp_dir, | |||
regions=regions, |