1 changed files with 2 additions and 2 deletions
+ 2
- 2
workflow.wdl
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| sample=sample_id + '.N', | sample=sample_id + '.N', | ||||
| fasta=fasta, | fasta=fasta, | ||||
| ref_dir=ref_dir, | ref_dir=ref_dir, | ||||
| recaled_bam=normal_BQSR_fb.recaled_bam, | |||||
| recaled_bam_index=normal_BQSR_fb.recaled_bam_index, | |||||
| recaled_bam=normal_replaceRG.deduped_bam, | |||||
| recaled_bam_index=normal_replaceRG.deduped_bam_index, | |||||
| dbsnp=dbsnp, | dbsnp=dbsnp, | ||||
| dbsnp_dir=dbsnp_dir, | dbsnp_dir=dbsnp_dir, | ||||
| regions=regions, | regions=regions, |
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