Browse Source

sort number file

master
LUYAO REN 5 years ago
parent
commit
745040715f
1 changed files with 1 additions and 1 deletions
  1. +1
    -1
      tasks/split_gvcf_files.wdl

+ 1
- 1
tasks/split_gvcf_files.wdl View File

@@ -13,7 +13,7 @@ task split_gvcf_files {

for i in {10..133}; do cat ${gvcf}| cut -f1-9,$i > $i.splited.vcf; done

ls *splited.vcf | paste - name > rename
ls *splited.vcf | sort -n | paste - name > rename

cat rename | while read a b; do mv $a $b.${chromo}.vcf; done


Loading…
Cancel
Save