LUYAO REN
5 лет назад
1 измененных файлов: 1 добавлений и 2 удалений
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workflow.wdl
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| import "./tasks/mergeSentieon.wdl" as mergeSentieon | import "./tasks/mergeSentieon.wdl" as mergeSentieon | ||||
| workflow project_name { | |||||
| workflow {{ project_name }} { | |||||
| File inputSamplesFile | File inputSamplesFile | ||||
| Array[Array[File]] inputSamples = read_tsv(inputSamplesFile) | Array[Array[File]] inputSamples = read_tsv(inputSamplesFile) | ||||
| File benchmarking_dir | File benchmarking_dir | ||||
| File ref_dir | File ref_dir | ||||
| String fasta | String fasta | ||||
| File sdf | |||||
| scatter (sample in inputSamples) { | scatter (sample in inputSamples) { | ||||
| call fastqc.fastqc as fastqc { | call fastqc.fastqc as fastqc { |
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