sentieon

workflow.wdl

@@ -9,7 +9,7 @@ import "./tasks/mergeNum.wdl" as mergeNum
 import "./tasks/mergeSentieon.wdl" as mergeSentieon
 
 
-workflow project_name {
+workflow {{ project_name }} {
 
 	File inputSamplesFile
 	Array[Array[File]] inputSamples = read_tsv(inputSamplesFile)
@@ -18,7 +18,6 @@ workflow project_name {
 	File benchmarking_dir
 	File ref_dir
 	String fasta
-	File sdf
 
 	scatter (sample in inputSamples) {
 		call fastqc.fastqc as fastqc {