LUYAO REN
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1 změnil soubory, kde provedl 1 přidání a 1 odebrání
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tasks/homo_bed.wdl
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| @@ -20,7 +20,7 @@ task homo_bed { | |||
| cat ${LCL8_HR_bed} | grep -w '^chr1\|^chr2\|^chr3\|^chr4\|^chr5\|^chr6\|^chr7\|^chr8\|^chr9\|^chr10\|^chr11\|^chr12\|^chr13\|^chr14\|^chr15\|^chr16\|^chr17\|^chr18\|^chr19\|^chr20\|^chr21\|^chr22\|^chrX' > LCL8_HR_bed.chr1-22.x.bed | |||
| /opt/ccdg/bedtools-2.27.1/bin/bedtools multiinter -i LCL5_HR_bed.chr1-22.x.bed LCL6_HR_bed.chr1-22.x.bed LCL7_HR_bed.chr1-22.x.bed LCl8_HR_bed.chr1-22.x.bed > Quartet.HR.merged.bed | |||
| /opt/ccdg/bedtools-2.27.1/bin/bedtools multiinter -i LCL5_HR_bed.chr1-22.x.bed LCL6_HR_bed.chr1-22.x.bed LCL7_HR_bed.chr1-22.x.bed LCL8_HR_bed.chr1-22.x.bed > Quartet.HR.merged.bed | |||
| cat Quartet.HR.merged.bed | grep "1,2,3,4" | cut -f1-3 > Quartet.HR.merged.intersect.bed | |||
| >>> | |||
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