LUYAO REN
5 years ago
1 changed files with 1 additions and 1 deletions
+ 1
- 1
tasks/two_family_merge.wdl
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| command <<< | command <<< | ||||
| cat ${LCL5_trio_vcf} | grep -v '##' > ${family_name}.LCL5.txt | cat ${LCL5_trio_vcf} | grep -v '##' > ${family_name}.LCL5.txt | ||||
| cat ${LCL6_trio_vcf} | grep -v '##' > ${family_name}.LCL6.txt | cat ${LCL6_trio_vcf} | grep -v '##' > ${family_name}.LCL6.txt | ||||
| python opt/merge_two_family.py -LCL5 ${family_name}.LCL5.txt -LCL6 ${family_name}.LCL6.txt -family ${family_name} | |||||
| python /opt/merge_two_family.py -LCL5 ${family_name}.LCL5.txt -LCL6 ${family_name}.LCL6.txt -family ${family_name} | |||||
| >>> | >>> | ||||
| runtime { | runtime { |
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