LUYAO REN
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tasks/two_family_merge.wdl
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| @@ -9,7 +9,7 @@ task two_family_merge { | |||
| command <<< | |||
| cat ${LCL5_trio_vcf} | grep -v '##' > ${family_name}.LCL5.txt | |||
| cat ${LCL6_trio_vcf} | grep -v '##' > ${family_name}.LCL6.txt | |||
| python opt/merge_two_family.py -LCL5 ${family_name}.LCL5.txt -LCL6 ${family_name}.LCL6.txt -family ${family_name} | |||
| python /opt/merge_two_family.py -LCL5 ${family_name}.LCL5.txt -LCL6 ${family_name}.LCL6.txt -family ${family_name} | |||
| >>> | |||
| runtime { | |||
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