@@ -19,6 +19,7 @@ task multiqc { | |||
mkdir -p /cromwell_root/tmp/fastqc | |||
mkdir -p /cromwell_root/tmp/fastqscreen | |||
mkdir -p /cromwell_root/tmp/bamqc | |||
mkdir -p /cromwell_root/tmp/rnaseq | |||
cp ${sep=" " read1_zip} ${sep=" " read2_zip} /cromwell_root/tmp/fastqc | |||
cp ${sep=" " txt1} ${sep=" " txt2} /cromwell_root/tmp/fastqscreen |