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qualimap rnaseq qc

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LUYAO REN 5 years ago
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      tasks/multiqc.wdl

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tasks/multiqc.wdl View File

@@ -19,6 +19,7 @@ task multiqc {
mkdir -p /cromwell_root/tmp/fastqc
mkdir -p /cromwell_root/tmp/fastqscreen
mkdir -p /cromwell_root/tmp/bamqc
mkdir -p /cromwell_root/tmp/rnaseq

cp ${sep=" " read1_zip} ${sep=" " read2_zip} /cromwell_root/tmp/fastqc
cp ${sep=" " txt1} ${sep=" " txt2} /cromwell_root/tmp/fastqscreen

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