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tasks/CallableLoci.wdl
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| @@ -24,7 +24,7 @@ task CallableLoci { | |||
| --minMappingQuality 20 \ | |||
| --minDepth 10 \ | |||
| --minDepthForLowMAPQ 10 \ | |||
| --fix_misencoded_quality_scores \ | |||
| --fix_misencoded_quality_scores \ | |||
| -summary ${sample}_table.txt \ | |||
| -o ${sample}_callable_status.bed | |||
| >>> | |||
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