更新 'tasks/manta.wdl'

tasks/manta.wdl

@@ -15,6 +15,7 @@ task manta_calling{
     String out_dir = "${sample_id}_result"
     command <<<
     set -exo pipefail
+    cpu=$(nproc)
     /home/biosoft/manta-1.6.0.centos6_x86_64/bin/configManta.py \
     --normalBam ${normal_bam} \
     --tumorBam ${tumour_bam} \