1 gewijzigde bestanden met toevoegingen van 4 en 4 verwijderingen
+ 4
- 4
workflow.wdl
Bestand weergeven
| @@ -3,8 +3,8 @@ import "./tasks/bcftools_concat.wdl" as bcftools_concat | |||
| import "./tasks/annovar.wdl" as annovar | |||
| workflow {{ project_name }} { | |||
| File tumour_bam | |||
| File tumour_bam_bai | |||
| File tumor_bam | |||
| File tumor_bam_bai | |||
| File normal_bam | |||
| File normal_bam_bai | |||
| String ref_fasta | |||
| @@ -23,8 +23,8 @@ workflow {{ project_name }} { | |||
| call stralka.strelka_calling as stralka{ | |||
| input: | |||
| tumour_bam=tumour_bam, | |||
| tumour_bam_bai=tumour_bam_bai, | |||
| tumor_bam=tumor_bam, | |||
| tumor_bam_bai=tumor_bam_bai, | |||
| normal_bam=normal_bam, | |||
| normal_bam_bai=normal_bam_bai, | |||
| ref_fasta=ref_fasta, | |||
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