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workflow.wdl
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| } | } | ||||
| call bcftools.bcftools as strelka_bcftools { | |||||
| input: | |||||
| vcf=bcftools_concat.concat_vcf, | |||||
| fasta=ref_fasta, | |||||
| ref_dir=ref_fasta_dir, | |||||
| docker=docker_bcftools, | |||||
| cluster_config="OnDemand bcs.ps.g.large img-ubuntu-vpc", | |||||
| disk_size=disk_size | |||||
| } | |||||
| if (Annovar){ | if (Annovar){ | ||||
| call annovar.ANNOVAR as TNseq_ANNOVAR { | call annovar.ANNOVAR as TNseq_ANNOVAR { | ||||
| input: | input: |
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