|
|
|
|
|
|
|
|
vcf=sentieon_TNseq.vcf, |
|
|
vcf=sentieon_TNseq.vcf, |
|
|
fasta=ref_fasta, |
|
|
fasta=ref_fasta, |
|
|
ref_dir=ref_fasta_dir, |
|
|
ref_dir=ref_fasta_dir, |
|
|
docker=bcftools_docker, |
|
|
|
|
|
|
|
|
docker=docker_bcftools, |
|
|
cluster_config=cluster_config, |
|
|
cluster_config=cluster_config, |
|
|
disk_size=disk_size |
|
|
disk_size=disk_size |
|
|
} |
|
|
} |
|
|
|
|
|
|
|
|
vcf=sentieon_TNscope.vcf, |
|
|
vcf=sentieon_TNscope.vcf, |
|
|
fasta=ref_fasta, |
|
|
fasta=ref_fasta, |
|
|
ref_dir=ref_fasta_dir, |
|
|
ref_dir=ref_fasta_dir, |
|
|
docker=bcftools_docker, |
|
|
|
|
|
|
|
|
docker=docker_bcftools, |
|
|
cluster_config=cluster_config, |
|
|
cluster_config=cluster_config, |
|
|
disk_size=disk_size |
|
|
disk_size=disk_size |
|
|
} |
|
|
} |
|
|
|
|
|
|
|
|
vcf=bcftools_concat.concat_vcf, |
|
|
vcf=bcftools_concat.concat_vcf, |
|
|
fasta=ref_fasta, |
|
|
fasta=ref_fasta, |
|
|
ref_dir=ref_fasta_dir, |
|
|
ref_dir=ref_fasta_dir, |
|
|
docker=bcftools_docker, |
|
|
|
|
|
|
|
|
docker=docker_bcftools, |
|
|
cluster_config=cluster_config, |
|
|
cluster_config=cluster_config, |
|
|
disk_size=disk_size |
|
|
disk_size=disk_size |
|
|
} |
|
|
} |