@@ -48,7 +48,7 @@ workflow {{ project_name }} { | |||
Boolean Annovar | |||
if (normal_in1 != ""){ | |||
if (normal_deduped_bam != ""){ | |||
call Sentieon_BQSR.Sentieon_BQSR as Sentieon_BQSR_normal{ | |||
input: | |||
@@ -69,7 +69,7 @@ if (normal_in1 != ""){ | |||
} | |||
if (tumor_in1 != ""){ | |||
if (tumor_deduped_bam != ""){ | |||
call Sentieon_BQSR.Sentieon_BQSR as Sentieon_BQSR_tumor{ | |||
input: |