更新 'workflow.wdl'

workflow.wdl

@@ -36,7 +36,8 @@ workflow {{ project_name }} {
 	call AnnotSV.AnnotSV as manta_AnnotSV{
 		input:
                 sample=sample_id,
-                somatic_vcf= manta_calling_SV.manta_indel_vcf,
+                somatic_vcf= manta_calling_SV.somatic_vcf,
+                germline_vcf = manta_calling_SV.germline_vcf,
                 annotsv_database=annotsv_database,
                 docker=docker_annotsv,
                 cluster_config=cluster_config,