@@ -0,0 +1,26 @@ | |||
import "./tasks/fastqscreen.wdl" as fastqscreen | |||
workflow {{ project_name }} { | |||
String sample_id | |||
File in1 | |||
File in2 | |||
File screen_ref_dir | |||
File fastq_screen_conf | |||
String docker | |||
String cluster_config | |||
String disk_size | |||
call fastqscreen.fastq_screen as fastq_screen{ | |||
input: | |||
read1=in1, | |||
read2=in2, | |||
sample=sample_id, | |||
docker=docker, | |||
cluster_config=cluster_config, | |||
disk_size=disk_size | |||
} | |||
} |