import "./tasks/fastqscreen.wdl" as fastqscreen | |||||
workflow {{ project_name }} { | |||||
String sample_id | |||||
File in1 | |||||
File in2 | |||||
File screen_ref_dir | |||||
File fastq_screen_conf | |||||
String docker | |||||
String cluster_config | |||||
String disk_size | |||||
call fastqscreen.fastq_screen as fastq_screen{ | |||||
input: | |||||
read1=in1, | |||||
read2=in2, | |||||
sample=sample_id, | |||||
docker=docker, | |||||
cluster_config=cluster_config, | |||||
disk_size=disk_size | |||||
} | |||||
} |