@@ -23,7 +23,6 @@ workflow {{ project_name }} { | |||
File annotsv_database | |||
String docker_annotsv | |||
String docker_sequenza | |||
if (defined(normal_bams) && size(normal_bams) > 0) { | |||
call cnvkit_multi.cnvkit_multi as cnvkit_multi{ | |||
input: | |||
@@ -40,8 +39,8 @@ workflow {{ project_name }} { | |||
docker=docker_cnvkit, | |||
cluster_config=cluster_config, | |||
disk_size=disk_size | |||
} | |||
}else{ | |||
} | |||
} else { | |||
call cnvkit.cnvkit as cnvkit{ | |||
input: | |||
sample_id=sample_id, |