1 changed files with 2 additions and 1 deletions
+ 2
- 1
workflow.wdl
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| String ref_fasta | String ref_fasta | ||||
| File ref_flat | File ref_flat | ||||
| File? bed_file | File? bed_file | ||||
| String Polidy | |||||
| File gc | File gc | ||||
| File tumor_bam | File tumor_bam | ||||
| File tumor_bam_bai | File tumor_bam_bai | ||||
| ref_dir=ref_fasta_cnvkit, | ref_dir=ref_fasta_cnvkit, | ||||
| fasta=ref_fasta, | fasta=ref_fasta, | ||||
| ref_flat=ref_flat, | ref_flat=ref_flat, | ||||
| hrd=HRD.hrd, | |||||
| Polidy=Polidy, | |||||
| bed_file=bed_file, | bed_file=bed_file, | ||||
| tumor_bam=tumor_bam, | tumor_bam=tumor_bam, | ||||
| tumor_bam_index=tumor_bam_bai, | tumor_bam_index=tumor_bam_bai, |
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