1 changed files with 2 additions and 1 deletions
+ 2
- 1
workflow.wdl
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| @@ -8,7 +8,7 @@ workflow {{ project_name }} { | |||
| File ref_fasta_cnvkit | |||
| String ref_fasta | |||
| File ref_flat | |||
| File bed_file | |||
| File? bed_file | |||
| File gc | |||
| File tumor_bam | |||
| File tumor_bam_bai | |||
| @@ -28,6 +28,7 @@ workflow {{ project_name }} { | |||
| ref_dir=ref_fasta_dir, | |||
| gc=gc, | |||
| normal_bam=normal_bam, | |||
| bed_file=bed_file, | |||
| normal_bam_index=normal_bam_bai, | |||
| tumor_bam=tumor_bam, | |||
| tumor_bam_index=tumor_bam_bai, | |||
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