1 changed files with 2 additions and 1 deletions
+ 2
- 1
workflow.wdl
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| File ref_fasta_cnvkit | File ref_fasta_cnvkit | ||||
| String ref_fasta | String ref_fasta | ||||
| File ref_flat | File ref_flat | ||||
| File bed_file | |||||
| File? bed_file | |||||
| File gc | File gc | ||||
| File tumor_bam | File tumor_bam | ||||
| File tumor_bam_bai | File tumor_bam_bai | ||||
| ref_dir=ref_fasta_dir, | ref_dir=ref_fasta_dir, | ||||
| gc=gc, | gc=gc, | ||||
| normal_bam=normal_bam, | normal_bam=normal_bam, | ||||
| bed_file=bed_file, | |||||
| normal_bam_index=normal_bam_bai, | normal_bam_index=normal_bam_bai, | ||||
| tumor_bam=tumor_bam, | tumor_bam=tumor_bam, | ||||
| tumor_bam_index=tumor_bam_bai, | tumor_bam_index=tumor_bam_bai, |
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