call hisat2.hisat2 as hisat2 { | call hisat2.hisat2 as hisat2 { | ||||
input: idx=idx, idx_prefix=idx_prefix, read_1P=read1, read_2P=read2 | |||||
input: idx=idx, idx_prefix=idx_prefix, read1=read1, read2=read2 | |||||
} | } | ||||
call samtools.samtools as samtools { | call samtools.samtools as samtools { |