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更新 'tasks/ballgown.wdl'

修复基因名部分无引号
tags/0.1.3
lizhihui 4 years ago
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commit
bee60eabe3
1 changed files with 2 additions and 0 deletions
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      tasks/ballgown.wdl

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tasks/ballgown.wdl View File

@@ -10,6 +10,8 @@ task ballgown {
mkdir -p /cromwell_root/tmp/${sample_id}
cp -r ${sep=" " ballgown} /cromwell_root/tmp/${sample_id}
ballgown /cromwell_root/tmp/${sample_id} ${sample_id}.txt
sed -i 's/"//g' ${base}.txt
sed -i '1s/FPKM./gene_id\t/g' ${base}.txt
>>>
runtime {

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