1 changed files with 4 additions and 4 deletions
+ 4
- 4
workflow.wdl
View File
| Int length_required1 | Int length_required1 | ||||
| Int disable_quality_filtering | Int disable_quality_filtering | ||||
| scatter (inputSamples in inputSamples){ | |||||
| scatter (sample in inputSamples){ | |||||
| call fastp.fastp as fastp { | call fastp.fastp as fastp { | ||||
| input: | input: | ||||
| sample_id= inputSamples[2], | |||||
| read1= inputSamples[0], | |||||
| read2= inputSamples[1], | |||||
| sample_id= sample[2], | |||||
| read1= sample[0], | |||||
| read2= sample[1], | |||||
| docker = fastp_docker, | docker = fastp_docker, | ||||
| cluster = fastp_cluster, | cluster = fastp_cluster, | ||||
| adapter_sequence = adapter_sequence, | adapter_sequence = adapter_sequence, |
Loading…