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更新 'README.md'

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liuruimei 3 年之前
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@@ -13,13 +13,13 @@ This APP developed for ecDNA structure construction
$ open-choppy-env

# Install the APP
$ choppy install YaqingLiu/variant-calling [-f]
$ choppy install liuruimei/prepareaa [-f]

# List the parameters
$ choppy samples YaqingLiu/variant-calling-latest [--no-default]
$ choppy samples liuruimei/prepareaa-latest --output sample.csv

# Submit you task with the `samples.csv file` and `project name`
$ choppy batch YaqingLiu/variant-calling-latest samples.csv -p Project [-l project:Label]
$ choppy batch liuruimei/prepareaa-latest samples.csv -p Project [-l project:Label]

# Query the status of all tasks in the project
$ choppy query -L project:Label | grep "status"

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