更新 'tasks/prepareaa.wdl'

tasks/prepareaa.wdl

@@ -21,7 +21,7 @@ task prepareaa {
                 
     mkdir -p /cromwell_root/tmp/aaresult
     /home/programs/PrepareAA-master/PrepareAA.py -s ${sample_name} -t 20 --cnvkit_dir /home/programs/cnvkit.py --sorted_bam ${dedup_bam} --run_AA --ref GRCh38 -o ${sample_id}
-    cp ${sample_id}  /cromwell_root/tmp/aaresult         
+    cp -r ${sample_id}  /cromwell_root/tmp/aaresult/         
   >>>
 
   runtime {