新

tasks/Dedup.wdl

@@ -11,7 +11,7 @@ task Dedup {
 		set -e
 		cp ${unsorted_bam} ./
 		input = basename ${unsorted_bam}
-		/src/Bismark-0.18.2/deduplicate_bismark -p --bam ./$input
+		/src/Bismark-0.18.2/deduplicate_bismark -p --bam ./${input}
 	>>>
 	runtime {
 		docker:docker