共有 2 個文件被更改，包括 4 次插入 和 4 次删除
+ 2
- 2
tasks/Annovar.wdl
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| @@ -21,8 +21,8 @@ task Annovar { | |||
| } | |||
| output { | |||
| File avinput = "${sample}.avinput" | |||
| File multianno_txt = "${sample}.hg19_multianno.txt" | |||
| File multianno_vcf = "${sample}.hg19_multianno.vcf" | |||
| File multianno_txt = "${sample}.hg38_multianno.txt" | |||
| File multianno_vcf = "${sample}.hg38_multianno.vcf" | |||
| } | |||
| } | |||
+ 2
- 2
workflow.wdl
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| @@ -39,9 +39,9 @@ workflow {{ project_name }} { | |||
| input: | |||
| docker=hardfiltration_docker, | |||
| sample=sample, | |||
| vcf_index=Haplotyper.vcf_index, | |||
| vcf_index=Haplotyper.vcf_idx, | |||
| disk_size=disk_size, | |||
| vcf_file=Haplotyper.vcf_file, | |||
| vcf_file=Haplotyper.vcf, | |||
| cluster_config=cluster_config | |||
| } | |||
| call Annovar.Annovar as Annovar { | |||
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