junshang
/
rnaseq-engineering
关注 1
点赞 0
派生 0
代码 工单 0 合并请求 0 版本发布 11 百科 动态

提交图

  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • |\
  • * |
  • | *
  • |/
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • |\
  • * |
  • | *
  • | *
  • |/
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • *
  • 8ceecb1 (HEAD -> master, tag: v0.2.9) change GENE_ID to gene_id in ballgown task by stead99 2021-03-01 14:44:05 +0800
  • 3353d39 (tag: v0.2.8) modify the regular expression for obtaining sample ID by stead99 2021-03-01 08:59:03 +0800
  • c689d5c (tag: v0.2.7) delete sample_id in count module by stead99 2021-02-28 09:38:11 +0800
  • 116f698 add gene_abundance file in count task by stead99 2021-02-28 09:31:21 +0800
  • 691db99 (tag: v0.2.6) unified output file prefix by stead99 2021-02-13 11:50:20 +0800
  • 3c076d9 (tag: v0.2.5) add sam as hisat2 output by stead99 2021-02-01 16:10:15 +0800
  • a092c43 remove hisat2 sam output and qualimap bamqc by stead99 2021-02-01 16:01:21 +0800
  • 810791b (tag: v0.2.4) revise fastq output by stead99 2021-01-22 13:26:27 +0800
  • 5e8e1f7 (tag: v0.2.3) [Fix Bug] to_json filter doesn't exist & imporve schema. by YJC 2021-01-20 00:22:21 +0800
  • 09187e0 (tag: v0.2.2) Improve indentation. by YJC 2021-01-19 20:35:48 +0800
  • c37b3ec Improve format. by YJC 2021-01-19 20:31:40 +0800
  • 9e1b95f (tag: v0.2.1) reivse input boolean type by stead99 2021-01-19 17:43:47 +0800
  • 6f018f4 reivse input boolean type by stead99 2021-01-19 16:27:56 +0800
  • 117da06 reivse input by stead99 2021-01-19 16:13:39 +0800
  • fc4b9d7 revise readme by stead99 2021-01-19 08:58:01 +0800
  • d4a4b06 Merge http://choppy.3steps.cn/junshang/rnaseq-engineering by stead99 2021-01-19 08:53:34 +0800
  • a763afd revise readme by stead99 2021-01-19 08:49:19 +0800
  • b1acd1d (tag: v0.2.0) Add manifest.json & schema.json. by YJC 2021-01-19 06:17:11 +0800
  • 3dcd37a (tag: v0.1.0) revise ballgwon output files by stead99 2021-01-17 18:09:22 +0800
  • f56829c revise readme by stead99 2021-01-06 20:05:20 +0800
  • e62f1ac revise readme by stead99 2021-01-06 20:04:45 +0800
  • 35d0d89 revise readme by stead99 2021-01-06 20:04:09 +0800
  • 6c74902 revise readme by stead99 2021-01-06 19:56:04 +0800
  • 241ae94 remove fastp useless paramater by stead99 2021-01-06 19:43:58 +0800
  • b7bda92 remove fastp useless paramater by stead99 2021-01-06 18:42:02 +0800
  • 7c829c5 revise samtools sort -m by stead99 2021-01-06 18:18:04 +0800
  • 03e4ceb revise samtools sort -m by stead99 2021-01-06 17:56:37 +0800
  • 666f527 revise samtools sort -m by stead99 2021-01-06 17:44:17 +0800
  • fdeace5 revise fastp by stead99 2021-01-06 17:27:04 +0800
  • 794cad5 revise fastp by stead99 2021-01-06 17:23:07 +0800
  • 0dcb8a5 revise fastp by stead99 2021-01-06 17:18:22 +0800
  • b099716 revise fastp by stead99 2021-01-06 17:16:43 +0800
  • 46cfcdb revise fastp by stead99 2021-01-06 17:13:35 +0800
  • 1c22f7c revise fastqc output by stead99 2021-01-06 15:50:51 +0800
  • 0980cf3 nt to $nt by stead99 2021-01-06 15:24:38 +0800
  • b0a99f4 revise workflow by stead99 2021-01-06 15:08:39 +0800
  • f2ad8a8 revise workflow by stead99 2021-01-06 15:06:21 +0800
  • 6c72014 revise workflow by stead99 2021-01-06 14:39:42 +0800
  • 44f9739 revise inputs by stead99 2021-01-06 14:31:22 +0800
  • e341893 revise inputs by stead99 2021-01-06 14:11:20 +0800
  • 9ab997b add fastp and revise samtools thread by stead99 2021-01-06 11:39:40 +0800
  • e4e128e revise samtools output by stead99 2020-12-29 11:11:34 +0800
  • 2e5b254 revise samtools output by stead99 2020-12-29 10:33:08 +0800
  • 8dccd3f revise samtools output by stead99 2020-12-29 10:28:52 +0800
  • 3378a0a revise samtools output by stead99 2020-12-29 10:26:35 +0800
  • fa79e25 revise samtools output by stead99 2020-12-29 00:23:23 +0800
  • 737260c revise samtools output by stead99 2020-12-28 23:57:39 +0800
  • 44b4784 revise samtools output by stead99 2020-12-28 23:40:38 +0800
  • e14cb27 revise samtools output by stead99 2020-12-28 23:10:16 +0800
  • a8bf10f revise samtools output by stead99 2020-12-28 23:09:00 +0800
  • 3213be0 revise samtools output by stead99 2020-12-28 23:01:50 +0800
  • f9a178d revise qualimap by stead99 2020-12-28 22:07:26 +0800
  • 49a0098 revise qualimap by stead99 2020-12-28 21:49:59 +0800
  • b80779a revise qualimap by stead99 2020-12-28 21:45:34 +0800
  • a7b69fe revise qualimap by stead99 2020-12-28 21:05:40 +0800
  • 0339137 revise fastqscreen by stead99 2020-12-28 16:35:48 +0800
  • 5a89d17 add sample_id in input by stead99 2020-12-27 11:57:42 +0800
  • 5ad0711 add sample_id in workflow by stead99 2020-12-27 11:22:50 +0800
  • 23d295f add count length in workflow by stead99 2020-12-27 11:18:22 +0800
  • 791354e add boolean pre_alignment_qc in workflow by stead99 2020-12-27 11:12:54 +0800
  • 2941251 uniform delimiter by stead99 2020-12-27 11:07:00 +0800
  • 9870850 add count and pre qc control by stead99 2020-12-27 11:02:30 +0800
  • 640097a add count and pre qc control by stead99 2020-12-27 10:54:14 +0800
  • 2a3c638 Add fastq_screen conf template. by choppy 2020-07-21 13:17:12 +0000
  • baaa3ab [Fix Bug] No space on the driver by choppy 2020-07-21 13:16:14 +0000
  • f7f2fb8 revised inputs by stead99 2020-07-02 08:21:12 +0800
  • 30fb9b8 revised fastqcreen by stead99 2020-07-01 15:34:57 +0800
  • 991fb8e revised readme by stead99 2020-07-01 15:09:49 +0800
  • 6cbcbb8 revised readme by stead99 2020-07-01 15:09:20 +0800
  • 1b8046e remove samples by stead99 2020-07-01 15:08:05 +0800
  • dfe08b5 add qualimap by stead99 2020-07-01 14:10:04 +0800
  • d430f72 revised ballgown by stead99 2020-07-01 13:43:14 +0800
  • a63567d revised ballgown by stead99 2020-07-01 13:04:07 +0800
  • 4e29438 add qualimap by stead99 2020-07-01 11:42:41 +0800
  • dc858c3 add qualimap by stead99 2020-07-01 11:40:51 +0800
  • e583755 revised fastqc by stead99 2020-07-01 11:06:29 +0800
  • c9056b3 revised fastqcreen by stead99 2020-07-01 11:03:00 +0800
  • c6cbff5 revised fastqcreen by stead99 2020-07-01 11:00:53 +0800
  • 7b95253 add-disk-size by stead99 2020-07-01 10:57:41 +0800
  • 5d5cd9c add-disk-size by stead99 2020-07-01 10:45:47 +0800
  • def8640 add-fastqc-fastqcreen by stead99 2020-07-01 10:38:31 +0800
  • 2818e9d revised ballgown by stead99 2020-07-01 09:46:51 +0800
  • 12b6f22 revised ballgown by stead99 2020-06-30 17:47:58 +0800
  • a554bbe revised ballgown by stead99 2020-06-30 17:20:06 +0800
  • 0d79bca revised ballgown by stead99 2020-06-30 16:29:13 +0800
  • c94776f revised ballgown by stead99 2020-06-30 16:05:15 +0800
  • 9b06119 revised ballgown by stead99 2020-06-30 15:44:27 +0800
  • c763cb5 revised ballgown by stead99 2020-06-30 15:12:45 +0800
  • e587e7e revised ballgown by stead99 2020-06-30 10:13:58 +0800
  • 0b17dfa revised workflow by stead99 2020-06-30 09:53:40 +0800
  • 1dc7e62 revised workflow by stead99 2020-06-30 09:44:46 +0800
  • b4c4eea revised workflow by stead99 2020-06-30 09:30:55 +0800
  • 5eae371 revised default by stead99 2020-06-30 08:50:33 +0800
  • c4b0419 revised default by stead99 2020-06-30 08:43:09 +0800
  • af5ffcf revised input by stead99 2020-06-29 17:22:40 +0800
  • 2f4cad2 revised input by stead99 2020-06-29 17:17:42 +0800
  • 7ad7bb4 revised input by stead99 2020-06-29 17:12:27 +0800
  • efdf800 revised input by stead99 2020-06-29 17:06:39 +0800
  • b82cb4c revised input by stead99 2020-06-29 17:02:15 +0800
  • 3f9dd3a readme revised by stead99 2020-06-29 15:57:30 +0800