1 zmienionych plików z 3 dodań i 3 usunięć
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- 3
tasks/ballgown.wdl
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| @@ -6,9 +6,9 @@ task ballgown { | |||
| String cluster | |||
| command <<< | |||
| #mkdir /cromwell_root/tmp/ | |||
| #cp -r ${ballgown} /cromwell_root/tmp/ | |||
| Rscript /usr/bin/ballgown.R ${ballgown} ${base}.txt | |||
| mkdir /cromwell_root/tmp/ | |||
| cp -r ${sep=" " ballgown} /cromwell_root/tmp/ballgown | |||
| Rscript /usr/bin/ballgown.R /cromwell_root/tmp/ballgown/${base} ${base}.txt | |||
| >>> | |||
| runtime { | |||
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