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add-cluster

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stead99 5 年之前
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共有 2 個檔案被更改,包括 6 行新增0 行删除
  1. +3
    -0
      defaults
  2. +3
    -0
      inputs

+ 3
- 0
defaults 查看文件

"idx_prefix":"tophat2", "idx_prefix":"tophat2",
"adapter": "oss://pgx-reference-data/reference/illumina_adapter/TruSeq3-PE.fa", "adapter": "oss://pgx-reference-data/reference/illumina_adapter/TruSeq3-PE.fa",
"fastqc_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/fastqc:v0.11.5", "fastqc_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/fastqc:v0.11.5",
"fastqc_cluster": "OnDemand bcs.a2.large img-ubuntu-vpc",
"trimmomatic_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/trimmomatic:v0.3.8", "trimmomatic_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/trimmomatic:v0.3.8",
"trimmomatic_cluster": "OnDemand bcs.a2.large img-ubuntu-vpc",
"tophat2_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/tophat2:2.0.14", "tophat2_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/tophat2:2.0.14",
"tophat2_cluster": "OnDemand bcs.a2.3xlarge img-ubuntu-vpc", "tophat2_cluster": "OnDemand bcs.a2.3xlarge img-ubuntu-vpc",
"cufflinks_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/cufflinks:v2.2.1" "cufflinks_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/cufflinks:v2.2.1"
"cufflinks_cluster": "OnDemand bcs.a2.large img-ubuntu-vpc"
} }

+ 3
- 0
inputs 查看文件

"{{ project_name }}.idx_prefix": "{{ idx_prefix }}", "{{ project_name }}.idx_prefix": "{{ idx_prefix }}",
"{{ project_name }}.baseout": "{{ baseout }}", "{{ project_name }}.baseout": "{{ baseout }}",
"{{ project_name }}.fastqc.docker": "{{ fastqc_docker }}", "{{ project_name }}.fastqc.docker": "{{ fastqc_docker }}",
"{{ project_name }}.fastqc.cluster": "{ fastqc_cluster }",
"{{ project_name }}.trimmomatic.docker": "{{ trimmomatic_docker }}", "{{ project_name }}.trimmomatic.docker": "{{ trimmomatic_docker }}",
"{{ project_name }}.trimmomatic.cluster": "{ trimmomatic_cluster }",
"{{ project_name }}.tophat2.docker": "{{ tophat2_docker }}", "{{ project_name }}.tophat2.docker": "{{ tophat2_docker }}",
"{{ project_name }}.tophat2.cluster": "{{ tophat2_cluster }}", "{{ project_name }}.tophat2.cluster": "{{ tophat2_cluster }}",
"{{ project_name }}.cufflinks.docker": "{{ cufflinks_docker }}" "{{ project_name }}.cufflinks.docker": "{{ cufflinks_docker }}"
"{{ project_name }}.cufflinks.cluster": "{ cufflinks_cluster }",
} }

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