用于miRNA-seq二代测序数据分析
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  1. {
  2. "{{ project_name }}.sample_ID": "{{ sample_id }}",
  3. "{{ project_name }}.raw_fastq": "{{ raw_fastq }}",
  4. "{{ project_name }}.adapter_seq": "{{ adapter_seq }}",
  5. "{{ project_name }}.randomBase_in_adapter": "{{ randomBase_in_adapter }}",
  6. "{{ project_name }}.docker_fastp": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/fastp:0.19.6",
  7. "{{ project_name }}.cluster_config": "OnDemand ecs.sn2.large img-ubuntu-vpc",
  8. "{{ project_name }}.disk_size": "200",
  9. "{{ project_name }}.qualified_quality_phred": "20",
  10. "{{ project_name }}.unqualified_percent_limit": "20",
  11. "{{ project_name }}.n_base_limit": "5",
  12. "{{ project_name }}.length_required": "16",
  13. "{{ project_name }}.dir_index_mature": "oss://pgx-reference-data/miRNAseq/miRNA_mature/",
  14. "{{ project_name }}.prefix_index_mature": "mature",
  15. "{{ project_name }}.sum_unmatch_quality_limit": "40",
  16. "{{ project_name }}.docker_bowtie": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/bowtie:1.2.2-20190326"
  17. }