更新 'workflow.wdl'

workflow.wdl

@@ -3,8 +3,10 @@ import "./tasks/rmats.wdl" as rmats
 
 workflow {{ project_name }} {
     String sample_id
-    File b1_txt
-    File b2_txt
+    File b1_txt_file
+    Array[Array[File]] b1_txt = read_csv(b1_txt_file)
+    File b2_txt_file
+    Array[Array[File]] b2_txt = read_csv(b2_txt_file)
     File reference_gtf_file
     
 
@@ -14,8 +16,8 @@ workflow {{ project_name }} {
 
 	call rmats.rmats as rmats {
 		input:
-		b1_txt = b1_txt,
-		b2_txt = b2_txt,
+        b1_txt_file = b1_txt_file
+        b2_txt_file = b2_txt_file
 		reference_gtf_file = reference_gtf_file,
 		sample_id = sample_id,
 		docker = rmats_docker,