@@ -8,8 +8,8 @@ task samtools_index { | |||
command <<< | |||
samtools index --help | |||
samtools index ${bam_file} ${clean_bam_name}.bai | |||
cp ${bam_file} ./${clean_bam_name} | |||
samtools index ${bam_file} ${clean_bam_name}.bai | |||
cp ${bam_file} ./${clean_bam_name} | |||
>>> | |||
runtime { |