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tasks/samtools_index.wdl
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| command <<< | command <<< | ||||
| samtools index --help | samtools index --help | ||||
| samtools index ${bam_file} ${clean_bam_name}.bai | |||||
| cp ${bam_file} ./${clean_bam_name} | |||||
| samtools index ${bam_file} ${clean_bam_name}.bai | |||||
| cp ${bam_file} ./${clean_bam_name} | |||||
| >>> | >>> | ||||
| runtime { | runtime { |
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