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| @@ -21,9 +21,9 @@ For RNA-seq data, from bams to AS Information files. | |||
| $ source activate choppy (open-choppy-env) | |||
| # 第一次安装 | |||
| $ choppy install chenqingwang/spladder-single | |||
| $ choppy install chenqingwang/SplAdder-single | |||
| # 非第一次安装 | |||
| $ choppy install chenqingwang/spladder-single -f | |||
| $ choppy install chenqingwang/SplAdder-single -f | |||
| # 查询已安装APP | |||
| $ choppy apps | |||
| @@ -33,12 +33,12 @@ $ choppy apps | |||
| ``` | |||
| # 准备 samples.csv 文件 | |||
| $ choppy samples chenqingwang/spladder-single-latest > samples.csv | |||
| $ choppy samples chenqingwang/SplAdder-single-latest > samples.csv | |||
| # 准备无默认参数的samples.csv 文件 | |||
| choppy samples --no-default chenqingwang/spladder-single-latest > samples.csv | |||
| choppy samples --no-default chenqingwang/SplAdder-single-latest > samples.csv | |||
| # 提交任务 | |||
| $ choppy batch chenqingwang/spladder-single-latest samples.csv -p Your_project_name -l Your_label | |||
| $ choppy batch chenqingwang/SplAdder-single-latest samples.csv -p Your_project_name -l Your_label | |||
| # 查询任务运行状况 | |||
| $ choppy query -L Your_label | grep "status" | |||
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